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CovidReference.com
Ecology of SARS-CoV-2 SARS-CoV-2 is present at the highest concentrations in the respiratory tract early in disease and then increases in the lower respiratory tract (Zhu N 2020, Wang 2020, Huang 2020, Wölfel 2020). The virus has also been found, albeit at low levels, in the kidney, liver, heart, brain, and blood (Puelles 2020). Outside the human body, the virus is more stable at low temperature and low humidity conditions, whereas warmer temperatures and higher humidity shorten the half-life (Matson 2020). It has also been shown to be detectable as an aerosol (in the air) for up to three hours, up to 24 hours on cardboard and up to two to three days on plastic and stainless steel (van Doremalen 2020). As expected, viral RNA was more likely to be found in areas immediately occupied by COVID-19 patients than in other hospital areas (Zhou J 2020). Another study documented contamination of toilets (toilet bowl, sink, and door handle) and air outlet fans (Ong SWX 2020). This is in line with the experience from MERS where many environmental surfaces of patients’ rooms, including points frequently touched by patients or healthcare workers, were contaminated by MERS-CoV (Bin 2016).
Person-to-person transmission Person-to-person transmission of SARS-CoV-2 was established within weeks of identification of the first cases (Chan JF 2020, Rothe 2020). Shortly after, it was suggested that asymptomatic individuals would probably account for a substantial proportion of all SARS-CoV-2 transmissions (Nishiura 2020, Li 2020). Viral load can be high 2-3 days before the onset of symptoms and almost half of all secondary infections are supposed to be caused by presymptomatic patients (He 2020). A key factor in the transmissibility of SARS-CoV-2 is the high level of viral shedding in the upper respiratory tract (Wolfel 2020), even among paucisymptomatic patients. Pharyngeal virus shedding is very high during the first week of symptoms, with a peak at > 7 x 108 RNA copies per throat swab on day 4. Infectious virus was readily isolated from samples derived from the throat or lung. That distinguishes it from SARS-CoV, where replication occured mainly in the lower respiratory tract (Gandhi 2020); SARS-CoV and MERS-CoV infect intrapulmonary epithelial cells more than cells of the upper airways (Cheng PK 2004, Hui 2018). The shedding of viral RNA from sputum appears to outlast the end of symptoms and seroconversion is not always followed by a rapid decline in viral load (Wolfel 2020). This contrasts with influenza where persons with asymptomatic disease generally have lower quantitative viral loads in secretions Kamps – Hoffmann
