FgeneshC2Human

Page 1

FGENESH 2.6 Prediction of potential genes in Homo_sapiens genomic DNA Seq name: test sequence Length of sequence: 2453 Number of predicted genes 1: in +chain 1, in -chain 0. Number of predicted exons 3: in +chain 3, in -chain 0. Positions of predicted genes and exons: Variant 1 from 1, Score:35.585309 CDSf

CDSi

1

1

594 1 1 1 1 1

CDSo

PolA

TSS

2

800 + + + + +

CDSl

TSS 1 CDSf 2 CDSi 3 CDSl PolA

1000 594 677 899 1972 2208

3

1200 768 1121 2100

1400 -6.59 12.09 20.06 9.54 1.12

1600 677 900 1972 -

1800 766 1121 2100

2000 90 222 129

Predicted protein(s): >FGENESH:[mRNA] 1 3 exon (s) 677 - 2100 444 bp, chain + ATGGTGCATCTGACTCCTGAGGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAAC GTGGATGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTGGTCTACCCTTGGACCCAG AGGTTCTTTGAGTCCTTTGGGGATCTGTCCACTCCTGATGCTGTTATGGGCAACCCTAAG GTGAAGGCTCATGGCAAGAAAGTGCTCGGTGCCTTTAGTGATGGCCTGGCTCACCTGGAC AACCTCAAGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTGACAAGCTGCACGTGGAT CCTGAGAACTTCAGGCTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCATCACTTTGGC AAAGAATTCACCCCACCAGTGCAGGCTGCCTATCAGAAAGTGGTGGCTGGTGTGGCTAAT GCCCTGGCCCACAAGTATCACTAA >FGENESH: 1 3 exon (s) 677 - 2100 147 aa, chain + MVHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPK VKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFG KEFTPPVQAAYQKVVAGVANALAHKYH

2208


Turn static files into dynamic content formats.

Create a flipbook
Issuu converts static files into: digital portfolios, online yearbooks, online catalogs, digital photo albums and more. Sign up and create your flipbook.