Insight (Issue 4, 10-08, 2019)

Page 1

Insight

Issue

4

Discover the different stages of cell differentiation Previewing Abcam tools for stem cell research

Tips to build multicolor panels for flow cytometry www.abcam.com/flow-tips




Stem cell markers Browse all stem cell products

Major embryonic stem cell markers Cell Surface Pluripotency Markers Target

Uniprot

Primary antibody

Cripto-1

P13385

PRF

Dax1

P51843

PRF

GDF1

P27539

PRF

GDF3

Q9NR23

PRF

Nanog

Q9H9S0

PRF

Oct4

Q01860

PRF

Sall4

Q9UJQ4

PRF

Induced (pluripotent stem) PS cell markers

Immunoassays

Proteins

Target

Uniprot

Primary antibody

Immunoassays

Proteins

ELISA SSE

RA

CD13

P15144

PRF

ELISA SSE

RA

R

Nanog

Q9H9S0

PRF

ELISA SSE

RA

R RA

Germ cell markers during specification

ELISA SSE

RA

c-kit

P10721

PRF

ELISA SSE

RA

Dazl

Q92904

PRF

R

MVH

Q9NQI0

PRF

RA

Oct4

Q01860

PRF

PRDM1/Blimp1

O75626

PRF

Sox2

P48431

PRF

ELISA SSE

Tbx3

O15119

PRF

R

Tcl1

P56279

PRF

R

ELISA SSE

RA R R

ELISA SSE

RA R

The ectoderm, and endoderm markers Transcription Factors

FGF-8

P55075

P

RA

RA

Noggin

Q13253

PRF

RA

RA

Otx2

P32243

PRF

R

PRF

R

p63/TP73L

Q9H3D4

PRF

PRF

RA

Pax2

Q02962

PRF

R

RA

Pax6

P26367

PRF

R

c-Myc

P01106

PRF

Klf4

O43474

PRF

Mycn

P04198

Nanog

Q9H9S0

Oct4

Q01860

PRF

Sall4

Q9UJQ4

PRF

Sox18

P35713

PRF

Sox2

P48431

PRF

Tcl1

P56279

PRF

ELISA SSE

ELISA SSE

ELISA SSE

R R ELISA SSE

RA R

Major hematopoietic stem cell markers

Major cancer stem cell markers

Target

Uniprot

Primary antibody

Immunoassays

Proteins

Target

Uniprot

Primary antibody

Immunoassays

Proteins

CD4

P01730

PRF

ELISA SSE

RA

ALDH1

P00352

PRF

ELISA SSE

R

CD34

P28906

PRF

R

CD13

P15144

PRF

ELISA SSE

RA

CD38

P28907

PRF

R

CD24

P25063

PRF

CD48

P09326

PRF

RA

CD44

P16070

PRF

CD90 / Thy1

P04216

PRF

R

CD90 / Thy1

P04216

P

R

CD244

Q9BZW8

P

ELISA

RA

CD133

O43490

PRF

R

c-kit

P10721

PRF

ELISA SSE

RA

CK5

P13647

PRF

Flt-3/CD135

P36888

PRF

ELISA SSE

RA

CK8

P05787

PRF

Lin28

Q9H9Z2

PRF

RA

CK10

P13645

PRF

Mac-1/CD11b

P11215

PRF

R

CK14

P02533

PRF

Slamf1/CD150

Q13291

PRF

R

CK15

P19012

PRF

CK18

P05783

PRF

Integrin alpha 6/CD49f

P23229

PRF

p75 NGFR/CD271

P08138

PRF

ELISA

R ELISA

ELISA SSE

R

R R R

ELISA SSE

R R

ELISA SSE

R R

ELISA

A: Active; ELISA: ELISA kit; F: BSA and azide free (± low endotoxin tested); P: Primary antibody; R: Recombinant; R: Recombinant monoclonal; SSE: SimpleStep ELISA® Kit

RA


Major cardiac stem cell markers Target

Uniprot

Primary antibody

67LR/RPSA

P08865

PRF

Cardiac troponin I

P19429

PRF

ELISA SSE

CD31

P16284

PRF

ELISA SSE

CD34

P28906

CD45

P08575

CD90 / Thy1

Major osteoprogenitor cell markers Proteins

Target

Uniprot

Primary antibody

Immunoassays

Proteins

R

ALPP

P05187

PRF

ELISA SSE

R

R

BAP1

Q92560

PRF

RA

RA

BAP31

P51572

PRF

R

PRF

R

BMP-2

P12643

PRF

PRF

RA

CD146/MUC18

P43121

PRF

P04216

PRF

R

Collagen I

P02452

PRF

CD105

P17813

PRF

RA

Collagen II

P02458

PRF

CD133

O43490

PRF

R

Decorin

P07585

P

ELISA SSE

RA

c-kit

P10721

PRF

RA

DKK3

Q9UBP4

PRF

ELISA SSE

RA

Integrin beta-1/CD29

P05556

PRF

R

FGF-2

P09038

PRF

ELISA

RA

Isl1

P61371

PRF

R

Fibronectin

P02751

PRF

ELISA SSE

R

Nkx2.5

P52952

PRF

R

Gremlin 1

O60565

P

Oct4

Q01860

PRF

ELISA SSE

RA

IGFBP-3

P17936

PRF

ELISA SSE

RA

TGF-β1

P01137

PRF

ELISA

RA

M-CSF

P09603

PRF

ELISA SSE

RA

VEGFR2/KDR

P35968

PRF

ELISA SSE

RA

Osteocalcin

P02818

PRF

ELISA SSE

R

Osteopontin

P10451

PRF

ELISA SSE

R

RANKL

O14788

PF

ELISA

RA

RUNX2

Q13950

PRF

Proteins

Sclerostin

Q9BQB4

P

RA

Sp7/Osterix

Q8TDD2

PRF

RA

SPARC

P09486

PRF

ELISA SSE

RA

RA

TGF-β1

P01137

PRF

ELISA

RA

R

Tpo

P07202

PRF

ELISA SSE

RA

Immunoassays

ELISA SSE

ELISA SSE

Major mesenchymal stem cell markers Target

Uniprot

Primary antibody

CD10/Neprilysin

P08473

PRF

CD13

P15144

PRF

CD73

P21589

PRF

Immunoassays ELISA SSE

ELISA

CD90 / Thy1

P04216

PRF

CD105

P17813

PRF

ELISA SSE

RA

CD140b/PDGFRB

P09619

PRF

ELISA

RA

CD146/MUC18

P43121

PRF

HER-2/erbB2 (CD340)

P04626

PRF

Integrin beta-1/CD29

P05556

PRF

Oct4

Q01860

PRF

p75 NGFR/CD271

P08138

PRF

R

Target

Uniprot

alpha-smooth muscle actin

P12814

PRF

CD56/NCAM1

P13591

PRF

CD146/MUC18

P43121

PRF

Desmin

P17661

PRF

FABP3

P05413

PRF

Myosin-9

P35579

PRF

VE-Cadherin

P33151

PRF

RA R

ELISA SSE

R R

RA

R ELISA SSE

RA R

Major skin stem cell markers

RA

Target

Uniprot

Primary antibody

R

CD34

P28906

PRF

ELISA SSE

RA

CK15

P19012

PRF

ELISA

RA

DLL1

O00548

P

ELISA SSE

R

EGFR

P00533

PRF

ELISA SSE

RA

Follistatin

P19883

PRF

ELISA SSE

RA

IGF1R/CD221

P08069

PRF

ELISA

RA

P23229

PRF

ELISA

Major myogenic precursor cell markers Primary antibody

ELISA

Immunoassays

Proteins R R

Immunoassays

Proteins

Integrin alpha 6/CD49f

ELISA SSE

R

p63/TP73L

Q9H3D4

PRF

ELISA SSE

Tenascin C

P24821

PRF

ELISA

R

TGFBR2/TBRII

P37173

PRF

ELISA

R

ELISA

R

R

R R ELISA SSE

R R

ELISA SSE

R

Major neural stem cell markers Target

Uniprot

Primary antibody

ABCG2/CD338

Q9UNQ0

PRF

R

CD24

P25063

PRF

R

CD34

P28906

PRF

R

CD45

P08575

PRF

RA

CD133

O43490

PRF

R

FGFR4

P22455

PRF

RA

Sox2

P48431

PRF

RA

Immunoassays

Proteins

Major adipose-derived stem cell markers Target

Uniprot

Primary antibody

CD34

P28906

PRF

CD44

P16070

PRF

ELISA

R

ICAM-1/CD54

P05362

PRF

ELISA SSE

RA

Immunoassays

Proteins R

Major intestinal stem cell markers Target

Uniprot

Primary antibody

Bmi1

P35226

PRF

R

Gremlin 1

O60565

P

RA

Hopx

Q9BPY8

PRF

R

Tert

O14746

PRF

R

Immunoassays

A: Active; ELISA: ELISA kit; F: BSA and azide free (± low endotoxin tested); P: Primary antibody; R: Recombinant; R: Recombinant monoclonal; SSE: SimpleStep ELISA® Kit

Proteins


Select the right antibody for working with collagen Explore our protocol tips for working with collagen

Collagens are highly conserved proteins, characterized by an uninterrupted glycine-X-Y triplet repeat that gives them their triple helical structure. It is the close similarity of this triple helical structure across the different collagen types that can make it very difficult to generate antibodies specific for a particular collagen. In order to make a collagen antibody specific, the immunogen used for the antibody production must either be dependent on non-denatured three-dimensional collagen epitopes or shorter peptide sequences only found in specific collagens. Depending on the type of antibody you use, you will need to adapt your protocol accordingly.

Structure

Distribution

Sequence specific antibodies

I

Fibrillar

Ubiquitous

ab138492

ab34710

Collagen

Structure-specific antibodies

II

Fibrillar

Cartilage, vitreous

ab188570

ab34712

III

Fibrillar

Skin, blood vessels, intestine

ab184993

ab7778

IV

Network

Basement membranes

ab214417

ab6586

V

Fibrillar

Ubiquitous

VI

Network

Ubiquitous

ab182744

ab7046 ab6588

VII

Anchoring Fibrils

Dermis, bladder

ab223639

ab93350

ab58776

VIII

Network

Ubiquitous

IX

FACIT

Cartilage, cornea, vitreous

X

Network

Cartilage

ab182563

ab134568

XI

Fibrillar

Cartilage, intervertebal disc

ab196613

XV

FACIT

Basement membranes

ab58717

XVII

MACIT

Hemidesmo-somes in epithelia

ab184996

ab58632

ab79878

Table 1. Vertebrate collagens. 1Adapted from Shoulders MD, Raines RT. COLLAGEN STRUCTURE AND STABILITY. Annual review of biochemistry. 2009;78:929958. doi:10.1146/annurev.biochem.77.032207.120833.

References 1. Shoulders MD, Raines RT. COLLAGEN STRUCTURE AND STABILITY. Annual review of biochemistry. 2009;78:929-958. doi:10.1146/annurev.biochem.77.032207.120833. 2. Mocan E.Tagadiuc O.Nacu V. (2011) Aspects of collagen isolation procedure. Clin. Res. Studies 2, 3–5


Stem Cell marker antibody panel View our stem cell support page Product code

Panel name

Component product code ab16287

ab109884

ab238602

ab107156

ab254022

ab93758

ab93759

ab254027

ab254028

Embryonic Stem Cell Marker – Human I

Embryonic Stem Cell Marker – Human II

Embryonic Stem Cell Marker – Mouse

Hematopoietic Stem Cell Marker Panel - Human

Mesenchymal Stromal Cell Marker - Human

Mesenchymal Stromal Cell Marker - Mouse

Neural Stem Cell Marker - Human

Neural Stem Cell Marker Panel Mouse

Size

Component name

Tested applications

Species reactivity

1 x 50 µl

Anti-SSEA4 antibody [MC813]

Flow Cyt,ICC/IF,IHC-FoFr,WB

Hu,Ms,Rat Hu,Rb

ab16288

1 x 50 µg

Anti-TRA-1-60 (R) antibody [TRA-1-60]

Flow Cyt,ICC,ICC/IF,IHC-Fr,IP, RIA,WB

ab19857

1 x 50 µg

Anti-Oct4 antibody - ChIP Grade

ChIP,CHIPseq,Flow Cyt,ICC/IF,IP,WB

Hu,Ms,RMk,Shp Hu

ab21624

1 x 50 µl

Anti-Nanog antibody - ChIP Grade

ChIP,Flow Cyt,ICC,ICC/IF,IHC-P, sELISA,WB

ab97959

1 x 50 µg

Anti-SOX2 antibody

IHC - Wmt,ICC/IF,IHC-P,IHC-Fr, IP,WB

Chk,Hrs,Hu,Ms,Pig,Ql, Rat,Rtrout,Sc,Tray,Xl,Zfsh

ab21624

1 x 50 µl

Anti-Nanog antibody - ChIP Grade

ChIP,Flow Cyt,ICC,ICC/IF,IHC-P, sELISA,WB

Hu

ab19857

1 x 50 µg

Anti-Oct4 antibody - ChIP Grade

ChIP,CHIPseq,Flow Cyt,ICC/IF,IP,WB

Hu,Ms,RMk,Shp

Chk,Hrs,Hu,Ms,Pig,Ql, Rat,Rtrout,Sc,Tray,Xl,Zfsh

ab97959

1 x 50 µg

Anti-SOX2 antibody

IHC-Wmt,ICC/IF,IHC-P,IHC-Fr, IP,WB

ab16288

1 x 50 µg

Anti-TRA-1-60 (R) antibody [TRA-1-60]

Flow Cyt,ICC,ICC/IF,IHC-Fr,IP, RIA,WB

Hu,Rb

ab16285

1 x 50 µl

Anti-SSEA1 antibody [MC-480]

Flow Cyt,ICC/IF,IHC-FrFl,IHC-P, IHC-FoFr,IP

Hu,Ms

ab19857

1 x 50 µg

Anti-Oct4 antibody - ChIP Grade

ChIP,CHIPseq,Flow Cyt,ICC/IF, IP,WB

Hu,Ms,RMk,Shp

ab80892

1 x 50 µl

Anti-Nanog antibody

Flow Cyt,IHC - Wmt,ICC,ICC/IF, IHC-P,WB

Ms

ab97959

1 x 50 µg

Anti-SOX2 antibody

IHC-Wmt,ICC/IF,IHC-P,IHC-Fr,IP,WB

Chk,Hrs,Hu,Ms,Pig,Ql, Rat,Rtrout,Sc,Tray,Xl,Zfsh

ab81289

2 x 10 µl

Anti-CD34 antibody [EP373Y]

Flow Cyt,ICC/IF,IHC-Fr,IHC-P,IP,WB

EliAB,Dog,Hu,Ms,Rat,Shp

ab108403

2 x 10 µl

Anti-CD38 antibody [EPR4106]

WB, IHC-P, Flow Cyt

Hu

ab133707

2 x 10 µl

Anti-CD59 antibody [EPR6425(2)]

WB, IHC-P

Hu

ab133350

2 x 10 µl

Anti-CD90 / Thy1 antibody [EPR3133]

IHC-P, ICC/IF, WB

Hu

ab32363

2 x 10 µl

Anti-c-Kit antibody [YR145]

IHC-P, WB

Cm,Hu

ab6124

1 x 50 µg

Anti-CD44 antibody [F10-44-2]

Flow Cyt,ICC/IF,IHC-P,IHC-Fr,IP,WB

Hu

ab10559

1 x 50 µg

Anti-CD45 antibody

Flow Cyt,ICC/IF,IHC-P,IHC-Fr,WB

Hu,Mk,Pig

ab23894

1 x 50 µg

Anti-CD90 / Thy1 antibody [AF-9]

ELISA,Flow Cyt,IHC-Fr

Hu

ab44967

1 x 50 µl

Anti-CD105 antibody [105C02]

Flow Cyt,IHC-P,IHC-Fr,WB

Hu

ab52971

1 x 10 µl

IHC-P,IHC-Fr,WB

Hu

ab3105

1 x 50 µg

Anti-CD90 / Thy1 antibody [IBL-6/23]

Flow Cyt,ICC/IF,IHC-P,IHC-Fr, IHC-FoFr,IP

Ms

ab25340

1 x 50 µg

Anti-CD44 antibody [KM201]

BL,Flow Cyt,IHC-P,IHC-Fr, IHC-FoFr,IP,WB

Ms

ab25386

1 x 50 µg

Anti-CD45 antibody [I3/2.3]

Flow Cyt,IHC-P,IHC-Fr,IP

Ms

ab51317

1 x 50 µg

Anti-Sca1 / Ly6A/E antibody [E13 161-7]

ICC/IF

Ms

ab95623

1 x 50 µg

Anti-Integrin beta 1 antibody [KMI6]

Flow Cyt,ICC/IF,IHC-Fr,IP,WB

Ms

ab105389

1 x 20 µL

Anti-Nestin antibody [SP103]

Flow Cyt,ICC/IF,IHC-P,WB

Hu

ICC/IF,IHC-P,IHC - Wmt, Sandwich ELISA,WB

Hu,Leucor eri,Ms

Flow Cyt,ICC/IF,IHC-P,IP,WB

Dog,Hu,Ms,Rat

KO VALIDATED

KO VALIDATED

KO VALIDATED

Anti-Integrin beta 1 antibody [EP1041Y] KO VALIDATED

KO VALIDATED

ab92494

1 x 20 µL

Anti-SOX2 antibody [EPR3131]

ab216327

1 x 20 µL

Anti-Occludin antibody [EPR20992]

ab40772

1 x 20 µL

Anti-E Cadherin antibody [EP700Y]

Flow Cyt,ICC/IF,IHC-Fr,IHC-P,WB

Hu

ab108937

1 x 20 µL

Anti-Hes1 antibody [EPR4226]

Flow Cyt,ICC/IF,IHC-P,WB

Hu,Ms,Rat

ab52627

1 x 20 µL

Anti-Notch1 antibody [EP1238Y]

Flow Cyt,ICC/IF,IHC-P,WB

Hu,Ms,Cow

ab11512

2 x 10 µg

Anti-E Cadherin antibody [DECMA-1]

Flow Cyt,ICC/IF,IHC-Fr,WB

Dog,Ms

ab108937

2 x 10 µl

Anti-Hes1 antibody [EPR4226]

Flow Cyt,ICC/IF,IHC-P,WB

Hu,Ms,Rat

ab6142

2 x 10 µg

Anti-Nestin antibody [Rat 401]

ICC/IF,IHC-Fr,IHC-FoFr,IHC-P,WB

Cat,Hu,Mk,Shp

ab52627

2 x 10 µl

Anti-Notch1 antibody [EP1238Y]

Flow Cyt,ICC/IF,IHC-P,WB

Cow,Hu,Ms

ab216327

2 x 10 µl

Anti-Occludin antibody [EPR20992]

Flow Cyt,ICC/IF,IHC-P,IP,WB

Dog,Hu,Ms,Rat

ICC/IF,IHC-P,IHC - Wmt, Sandwich ELISA,WB

Hu,Leucor eri,Ms

ab92494

2 x 10 µl

Anti-SOX2 antibody [EPR3131]

KO VALIDATED

KO VALIDATED

Chk: Chicken; Cm: Common marmoset; EliAB: African bush elephant; Hrs: Horse; Hu: Human; Leucor eri: Leucoraja erinacea; Ms: Mouse; Ql: Quail; Rb: Rabbit; RMk: Rhesus monkey; Rtrout: Rainbow trout; Sc: Spotted catshark; Shp: Sheep; Tray:Thornback ray; Xl: Xenopus laevis; Zfsh: Zebrafish


Antibody selection and enhanced validation strategies webinar Speaker: Alejandra Solache, Vice President, New Product Development, Abcam plc

Antibody reproducibility remains an important issue across the Life Sciences industry. This webinar will cover: Advantages and constraints of available antibody formats Guidance on antibody selection Industry best practice for antibody validation The importance of validating antibodies for specific applications

View the webinar


Fluorescent staining of viable cells Visit our complete dye review online

Amine-reactive dyes for live:dead cell assays Amine-reactive dyes weakly stain viable cells by binding to cell surface amines and strongly stain membrane-compromised cells by reacting with intracellular amines. Dead and live cells can be differentiated by fluorescence level. Assay

Amine-reactive dyes

Instrument

Flow cytometer

Notes

Assay kits

Ex/Em 410/450 nm. Fixation compatible

ab176738

Ex/Em 408/512 nm. Fixation compatible

ab176739

Ex/Em 398/550 nm. Fixation compatible

ab176740

Ex/Em 353/442 nm. Fixation compatible

ab176741

Ex/Em 498/521 nm. Fixation compatible

ab176742

Ex/Em 547/573 nm. Fixation compatible

ab176743

Ex/Em 583/603 nm. Fixation compatible

ab176744

Ex/Em 649/660 nm. Fixation compatible

ab176745

Dye dilution assays The dyes in dye dilution assays are retained within cells over multiple generations. Daughter cells receive half of the dye of parent cells and assays are analyzed on a flow cytometer. Carboxyfluorescein succinimidyl ester (CFSE) is the longest established dye. Assay

Instrument

CFSE

Flow cytometer

CytoLabel Blue CytoLabel Green CytoLabel Red

Flow cytometer, microscope

CytoLabel Orange

Notes

Assay kits

Ex/Em 492/517 nm. Cytotoxic at higher concentrations. ab113853 Ex/Em 403/454 nm

ab176726

Ex/Em 511/525 nm

ab176735

Ex/Em 628/643 nm

ab176736

Ex/Em 542/556 nm

ab176737

Live Cell Labeling Kit The kits are a set of tools used to label cells for fluorescence microscopic investigations and flow cytometric investigations of cellular functions. The effective labelling of cells provides a powerful method for studying cellular events in a spatial and temporal context. Detection

Instrument

Red Fluorescence Blue Fluorescence Blue Fluorescence (Ex405nm) Green Fluorescence Green Fluorescence (Ex405nm)

Flow cytometer, fluorescence microscope

Notes

Assay kits

Assay time 2h. Ex/Em = 649/659 nm

ab187965

Assay time 2h. Ex/Em = 360/445 nm

ab187963

Assay time 2h. Ex/Em = 410/450 nm

ab187966

Assay time 2h. Ex/Em = 495/515 nm

ab187964

Assay time 2h. Ex/Em = 410/500 nm

ab187967


Directly conjugated antibodies for immunofluorescence and flow cytometry Explore our primary conjugates for flow or ICC/IF Recombinant RabMAb® technology provides excellent affinity and specificity In-house manufacturing ensures high-quality conjugates Individual product validation in 5-8 applications, including batch-validation Removal of free dye to ensure high signal to noise ratio Supporting data including images, references, and customer reviews

Fluorescent-labeled primary antibodies: Label

Validation data

Alexa Fluor

Immunofluorescence (ICC/IF), immunohistochemistry (IHC), flow cytometry

Phycoerythrin (R-PE)

ICC/IF and/or flow cytometry

FITC (Fluorescein isothiocyanate)

ICC/IF and/or flow cytometry

APC (Allophycocyanin)

ICC/IF and/or flow cytometry

PerCP (Peridinin chlorophyll)

ICC/IF and/or flow cytometry

®

Product highlight: Recombinant Anti-PD-L1 antibody [28-8] (Alexa Fluor® 488) (ab209959)

Anti-alpha Tubulin antibody [DM1A] Microtubule Marker (FITC) (ab64503)

Rabbit monoclonal antibody with high affinity and high specificity. Validated in Flow Cytometry and ICC/IF. Tested in Human.

Validated in IHC-Fr, Flow Cyt, ICC/IF. Tested in Mouse, Rat, Chicken, Guinea pig, Cow, Dog, Human, Pig, Xenopus laevis, Gerbil. Cited in 12 publication(s).

Ab209959 staining PDL1 in CHO-PDL1 cells. The lower panels demonstrate that ab209959 does not cross react with un-transfected CHO cells.

ICC/IF image of ab64503 stained human HeLa cells. Alexa Fluor® 594 Wheat Germ Agglutinin conjugate was used to label plasma membranes (red). DAPI was used to stain the cell nuclei (blue).

Alexa Fluor® is a registered trademark of Life Technologies. Alexa Fluor® dye conjugates contain(s) technology licensed to Abcam by Life Technologies.


Multicolor flow cytometry panel design Download fluorochrome chart Our guide to help you build successful multi-color flow cytometry panels 1. Know your flow cytometer Lasers: only fluorochromes excited by the corresponding wavelength of light from the laser can be used

Filters: detection of light emitted from fluorochromes is controlled by filters

UV 355 nm Violet 405 nm

<575 nm detected

Blue 488 nm

To ensure optimal detection, make sure you understand the combination of lasers /filters on your machine. Refer to your instrument’s manual or speak to your core facility

Yellow 561 nm

>520 nm detected 520 LP

630/20 (= 630Âą10nm)

Long pass dichroic filter

Band pass filter

575 SP >575 nm reflected

Red 640 nm Far red 750 nm

620-640 nm detected

<520 nm reflected

Short pass dichroic filter

2. Know your cell population, antigens, and fluorochromes High antigen expression and/or high cell populations = use dimmer fluorochromes, eg PerCP

Low/unknown antigen expression and/or low cell populations = use brighter fluorochromes, eg PE

Low

High

Bright

Dim

Check the relative brightness of your fluorochromes at www.abcam.com/fluorochrome-chart

3. Minimize spectral overlap Overlap

Minimize emission spectra overlap

No overlap

Sacrifice bright fluorochromes to avoid overlap Compensation can be used to control the effects of spectral overlap

4. Include controls

Unstained cells for defining negative populations, cell size, and granularity

Live/dead markers to isolate healthy cells

Single-stained positive controls for setting compensation

Fluorescence minus one staining to define positive populations

5. Optimize your staining protocol Antibody + Fc blocking reagent

Antibody Good titration

Bad titration

Antibody concentration: titrate your antibodies to avoid non-specific binding or reduced sensitivity www.abcam.com/multicolorflow

Specific antibody binding

Non-specific antibody binding

Fc blocking reagents: Human IgG for human Anti-CD16+ CD32 for mouse

Fc blocking: use Fc blocking reagents in cells with high content of Fc receptors (eg phagocytic cells) to avoid non-specific binding


How do you write a scientific paper in no time at all and not bore people to death? Never use a metaphor, simile, or another figure of speech which you are used to seeing in print. Never use a long word where a short one will do. If it is possible to cut a word out, always cut it out. Never use the passive where you can use the active. Never use a foreign phrase, a scientific word, or a jargon word if you can think of an everyday English equivalent. Break any of these rules sooner than say anything outright barbarous

Copyright Š 2019 Abcam. All rights reserved.

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Issuu converts static files into: digital portfolios, online yearbooks, online catalogs, digital photo albums and more. Sign up and create your flipbook.