FGENESH 2.6 Prediction of potential genes in Anopheles_gambiae genomic DNA Seq name: test sequence Length of sequence: 15626 Number of predicted genes 2: in +chain 2, in -chain 0. Number of predicted exons 6: in +chain 6, in -chain 0. Positions of predicted genes and exons: Variant 1 from 1, Score:69.682526 CDSf
CDSi
CDSl
CDSo
PolA
TSS
1
1
2073 1 + 1 + 1 +
2500 TSS 1 CDSo PolA
1
2
8244 2 2 2 2 2 2 2
+ + + + + + +
3000 2073 2589 4644
3500 4484
-6.38 34.01 0.75
2
9000 1 2 3 4 5
TSS CDSf CDSi CDSi CDSi CDSl PolA
2589 -
3
10000 8244 8406 9911 12648 13290 15011 15564
4000
11000 -
8456 10443 12753 13475 15334
12000 -3.08 6.19 45.96 -3.06 6.33 3.87 -2.05
4484
4644 1896
4
13000 8406 9911 12649 13290 15011
-
5
14000 8456 10441 12753 13475 15334
15564 51 531 105 186 324
Predicted protein(s): >FGENESH:[mRNA] 1 1 exon (s) 2589 - 4484 1896 bp, chain + ATGTCCCACTGGGCCCCAGAGTGGAAGAGGGCGGAGGCTAATCCAAGAGACCTTGGGGCC AGCTGGGATGTCAGGGGCAGCAGAGGCAGTGGCTGGAGTGGCCCCTTCGGCCATCAGGGA CCGAGAGCAGCAGGCTCCCGTGAACCACCACTCTGCTTTAAAATAAAGAACAATATGGTT GGTGTGGTCATTGGTTACAGTGGATCAAAAATAAAAGATCTACAACATTCGACAAACACT AAAATACAGATCATAAACGGGGAATCTGAAGCAAAAGTCAGAATTTTTGGCAATAGGGAA ATGAAAGCAAAGGCCAAAGCGGCTATAGAAACACTTATTAGAAAACAAGAAAGCTACAAC TCAGAATCCAGTGTGGATAATGCTGCATCCCAAACCCCTATTGGAAGAAATCTAGGCAGA AATGACATTGTTGGAGAAGCTGAGCCATTGTCAAATTGGGATCGCATTAGGGCAGCAGTC GTGGAGTGCGAAAAGAGAAAATGGGCAGATCTACCACCAGTTAAGAAAAACTTTTACATA GAATCCAAAGCAACAAGCTGCATGTCTGAAATGCAGGTGATTAACTGGAGAAAGGAAAAT TTCAACATAACGTGTGATGACTTGAAAAGTGGTGAAAAGCGTCTCATTCCAAAACCAACT TGCAGGTTTAAAGACGCTTTTCAGCAATACCCTGATCTTCTGAAAAGCATAATAAGGGTA GGGATTGTAAAGCCAACGCCAATTCAGTCACAGGCATGGCCAATTATTCTACAAGGAATA GATCTTATAGTAGTTGCACAAACCGGAACAGGGAAAACATTGTCCTATCTAATGCCTGGG TTTATTCATCTTGATTCTCAACCAATATCTAGAGAGCAAAGGAATGGGCCTGGGATGCTA GTCCTTACACCCACTAGAGAGTTGGCTCTTCACGTGGAAGCTGAATGTTCAAAGTATTCA
TATAAAGGTCTCAAAAGCATTTGCATATATGGTGGTAGAAACAGAAATGGACAAATAGAA GACATTAGCAAAGGTGTAGATATCATTATTGCAACTCCTGGGAGGCTGAATGACCTACAA ATGAATAACTCTGTCAACCTAAGAAGCATAACCTACTTGGTTATAGATGAGGCAGATAAA ATGCTGGATATGGAATTTGAACCCCAGATAAGGAAGATTTTATTAGATGTGCGCCCAGAC CGACAGACTGTTATGACAAGTGCAACTTGGCCAGATACTGTACGTCAACTAGCACTTTCT TATTTGAAAGATCCTATGATTGTTTATGTTGGTAATCTGAATCTAGTGGCTGTAAATACA GTGAAGCAAAATATAATTGTTACCACAGAAAAAGAAAAACGAGCTCTCACCCAAGAATTC GTAGAGAACATGTCACCCAACGACAAAGTCATCATGTTTGTCAGCCAAAAACATATTGCT GATGACTTGTCAAGCGACTTCAATATCCAAGGCATATCTGCAGAATCATTACATGGCAAC AGTGAACAGAGTGATCAAGAGCGAGCAGTAGAGGACTTTAAAAGCGGAAACATAAAGATA CTGATTACAACTGATATAGTATCCCGAGGTCTTGATCTTAATGATGTCACACATGTATAT AATTATGATTTCCCAAGGAATATTGACGTATATGTACACAGAGTAGGGTACATTGGACGG ACAGGAAAGACTGGCACATCAGTTACCCTCATCACTCAGAGAGATTCGAAAATGGCCGGT GAATTGATTAAAATTCTGGACAGAGCAAATCAGAGTGTTCCGGAAGATCTTGTAGTAATG GCTGAGCAATACAAGTTAAATCAACAAAAGAGGCACAGAGAAACACGATCAAGAAAACCT GGACAAAGACGCAAGGAGTTTTATTTTTTAAGTTGA >FGENESH: 1 1 exon (s) 2589 - 4484 631 aa, chain + MSHWAPEWKRAEANPRDLGASWDVRGSRGSGWSGPFGHQGPRAAGSREPPLCFKIKNNMV GVVIGYSGSKIKDLQHSTNTKIQIINGESEAKVRIFGNREMKAKAKAAIETLIRKQESYN SESSVDNAASQTPIGRNLGRNDIVGEAEPLSNWDRIRAAVVECEKRKWADLPPVKKNFYI ESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLKSIIRV GIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGML VLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQ MNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALS YLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIA DDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVY NYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVM AEQYKLNQQKRHRETRSRKPGQRRKEFYFLS >FGENESH:[mRNA] 2 5 exon (s) 8406 - 15334 1200 bp, chain + ATGATCTCATTTGACTCCAGGTCTCACATCCAGGTCACGCTGATGCGAGAGGGTGTCCAG CAGCCCTCCATCTACAGCTTCTCCCAAATAACCAGAAGCTTGTTTCTCAGCAATGGTGTG GCCGCCAACGACAAACTCCTTCTGTCCAGCAATCGCATCACCGCCATTGTCAATGCCTCG GTGGAAGTGGTCAACGTATTCTTCGAGGGCATTCAGTACATAAAGGTGCCTGTTACCGAT GCTCGTGACTCGCGTCTCTACGACTTTTTTGACCCCATTGCTGATCTTATCCACACCATC GATATGAGGCAGGGCCGTACGCTGCTGCACTGCATGGCTGGAGTGAGCCGTTCCGCCTCA CTGTGCCTTGCGTACCTCATGAAATACCACTCCATGTCGCTGCTGGACGCCCATACATGG ACCAAGTCGCGCCGCCCCATCATCCGGCCCAACAACGGCTTTTGGGAACAGCTCATCAAT TACGAATTCAAGCTGTTTAATAACAACACCGTGCGCATGATCAACTCGCCGGTAGGTAAC ATCCCTGACATCTATGAGAAGGACCTACGTATGATGATATCAATACAGAGTCTCGCACTG TCGCCTGGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCGGGT TCAAGCGATTCTCCTGCCTCAGCCTCTGGAAGTTTTGCTCTGTCACCCAGGCTGGAGTGC AGTGGCGTGATCTCCGCTCACTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC TCAGCCTCCCCAGTAGCTGGGATTATAGGCACGTGCCACCATGCCCGGCTAATTTTTGTA TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGACGGAGTCTCTCTCTGTCGCACAG GCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCACCTTCTGGATTCAAGCGA TTCTTCTGCCTCAGCTTCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCAGCTA ATTTTTGTTTTGTTTTGTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAG TGGCGCAATCTCGACCCACTACAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTC
AGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGTCACCACGCCTGGCTAATTTTTTGTAA >FGENESH: 2 5 exon (s) 8406 - 15334 399 aa, chain + MISFDSRSHIQVTLMREGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNAS VEVVNVFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSAS LCLAYLMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGN IPDIYEKDLRMMISIQSLALSPGLECSGAISAHCNLRLPGSSDSPASASGSFALSPRLEC SGVISAHCNLHLPGSSDSPASASPVAGIIGTCHHARLIFVFLVETGFHHVGQTESLSVAQ AGVQWRDLGSLQPPPSGFKRFFCLSFRVAGITGARHHAQLIFVLFCFETESRSVAQAGVQ WRNLDPLQPPPPGFKRFSCLSLPSSWDYRRVSPRLANFL