FGENESH 2.6 Prediction of potential genes in Homo_sapiens genomic DNA Seq name: test sequence Length of sequence: 15626 Number of predicted genes 3: in +chain 2, in -chain 1. Number of predicted exons 3: in +chain 2, in -chain 1. Positions of predicted genes and exons: Variant 1 from 1, Score:113.007812 CDSf
CDSi
CDSl
CDSo
PolA
TSS
1
1
736 1000 1 + 1 + 1 +
1500
2000
TSS 1 CDSo PolA
736 2589 4644
2500 4484
3000
-5.99 97.43 -1.68
3500
4000
2589 -
4484
8800
9000
8412 -
8933
4644
1896
1
2
7797 2 2 2 -
8000
8200
PolA 1 CDSo TSS
7797 8412 9318
8400 8933
8600 -1.07 15.12 -8.39
9200
9318
522
1
3
9584 3 + 3 + 3 +
9800 TSS 1 CDSo PolA
9584 9875 10611
10000 10447
10200 -10.59 35.42 -1.07
9875 -
10400 10447
10611 573
Predicted protein(s): >FGENESH:[mRNA] 1 1 exon (s) 2589 - 4484 1896 bp, chain + ATGTCCCACTGGGCCCCAGAGTGGAAGAGGGCGGAGGCTAATCCAAGAGACCTTGGGGCC AGCTGGGATGTCAGGGGCAGCAGAGGCAGTGGCTGGAGTGGCCCCTTCGGCCATCAGGGA CCGAGAGCAGCAGGCTCCCGTGAACCACCACTCTGCTTTAAAATAAAGAACAATATGGTT GGTGTGGTCATTGGTTACAGTGGATCAAAAATAAAAGATCTACAACATTCGACAAACACT AAAATACAGATCATAAACGGGGAATCTGAAGCAAAAGTCAGAATTTTTGGCAATAGGGAA ATGAAAGCAAAGGCCAAAGCGGCTATAGAAACACTTATTAGAAAACAAGAAAGCTACAAC TCAGAATCCAGTGTGGATAATGCTGCATCCCAAACCCCTATTGGAAGAAATCTAGGCAGA AATGACATTGTTGGAGAAGCTGAGCCATTGTCAAATTGGGATCGCATTAGGGCAGCAGTC GTGGAGTGCGAAAAGAGAAAATGGGCAGATCTACCACCAGTTAAGAAAAACTTTTACATA GAATCCAAAGCAACAAGCTGCATGTCTGAAATGCAGGTGATTAACTGGAGAAAGGAAAAT TTCAACATAACGTGTGATGACTTGAAAAGTGGTGAAAAGCGTCTCATTCCAAAACCAACT TGCAGGTTTAAAGACGCTTTTCAGCAATACCCTGATCTTCTGAAAAGCATAATAAGGGTA GGGATTGTAAAGCCAACGCCAATTCAGTCACAGGCATGGCCAATTATTCTACAAGGAATA
GATCTTATAGTAGTTGCACAAACCGGAACAGGGAAAACATTGTCCTATCTAATGCCTGGG TTTATTCATCTTGATTCTCAACCAATATCTAGAGAGCAAAGGAATGGGCCTGGGATGCTA GTCCTTACACCCACTAGAGAGTTGGCTCTTCACGTGGAAGCTGAATGTTCAAAGTATTCA TATAAAGGTCTCAAAAGCATTTGCATATATGGTGGTAGAAACAGAAATGGACAAATAGAA GACATTAGCAAAGGTGTAGATATCATTATTGCAACTCCTGGGAGGCTGAATGACCTACAA ATGAATAACTCTGTCAACCTAAGAAGCATAACCTACTTGGTTATAGATGAGGCAGATAAA ATGCTGGATATGGAATTTGAACCCCAGATAAGGAAGATTTTATTAGATGTGCGCCCAGAC CGACAGACTGTTATGACAAGTGCAACTTGGCCAGATACTGTACGTCAACTAGCACTTTCT TATTTGAAAGATCCTATGATTGTTTATGTTGGTAATCTGAATCTAGTGGCTGTAAATACA GTGAAGCAAAATATAATTGTTACCACAGAAAAAGAAAAACGAGCTCTCACCCAAGAATTC GTAGAGAACATGTCACCCAACGACAAAGTCATCATGTTTGTCAGCCAAAAACATATTGCT GATGACTTGTCAAGCGACTTCAATATCCAAGGCATATCTGCAGAATCATTACATGGCAAC AGTGAACAGAGTGATCAAGAGCGAGCAGTAGAGGACTTTAAAAGCGGAAACATAAAGATA CTGATTACAACTGATATAGTATCCCGAGGTCTTGATCTTAATGATGTCACACATGTATAT AATTATGATTTCCCAAGGAATATTGACGTATATGTACACAGAGTAGGGTACATTGGACGG ACAGGAAAGACTGGCACATCAGTTACCCTCATCACTCAGAGAGATTCGAAAATGGCCGGT GAATTGATTAAAATTCTGGACAGAGCAAATCAGAGTGTTCCGGAAGATCTTGTAGTAATG GCTGAGCAATACAAGTTAAATCAACAAAAGAGGCACAGAGAAACACGATCAAGAAAACCT GGACAAAGACGCAAGGAGTTTTATTTTTTAAGTTGA >FGENESH: 1 1 exon (s) 2589 - 4484 631 aa, chain + MSHWAPEWKRAEANPRDLGASWDVRGSRGSGWSGPFGHQGPRAAGSREPPLCFKIKNNMV GVVIGYSGSKIKDLQHSTNTKIQIINGESEAKVRIFGNREMKAKAKAAIETLIRKQESYN SESSVDNAASQTPIGRNLGRNDIVGEAEPLSNWDRIRAAVVECEKRKWADLPPVKKNFYI ESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLKSIIRV GIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGML VLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQ MNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALS YLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIA DDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVY NYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVM AEQYKLNQQKRHRETRSRKPGQRRKEFYFLS >FGENESH:[mRNA] 2 1 exon (s) 8412 - 8933 522 bp, chain ATGCCACCTGTGGCTGAAAGGGACCGACATAGAGCTTGGGCTGCAGCTTCAGAGGTTGCA AGCCTCAATCCTTGGCAGCTTCCACGTGGTGTTGAGCCTGTGGGTGCACAGAAGTCAAGA ATTGAGGTTTGGGAACCTTTGCCTAGGTTTCAGAGGATGTATGGAAACACCTGGATGCCC AGGCCGAGATGTGCTGCAGGGGCAGGGCCCTCAAGGAGAACCTCTGCTAGGGCAGTGCAT AAGGGAAATGTAGGGTGGGAGCCCCCACACAGAGTCCCCACTAGAGCACTGCTTAGTGGA GCTGTGAAAAGAGGACCAACATCCTCCATACCCCACGATGGTAGATCCACCAACAGCTTA CACCGTGCACCTGGAAAAGCCACAGAGACTCATTTCGAGCCCATGAAAGCAGCCGGGAGA GGGGGTATACTCTGCAAAGCCACAGGGACAGAGCTGCCCAAGACCATGGGAACCCACCTC TCGCATCAGCGTGACCTGGATGTGAGACCTGGAGTCAAATGA >FGENESH: 2 1 exon (s) 8412 - 8933 173 aa, chain MPPVAERDRHRAWAAASEVASLNPWQLPRGVEPVGAQKSRIEVWEPLPRFQRMYGNTWMP RPRCAAGAGPSRRTSARAVHKGNVGWEPPHRVPTRALLSGAVKRGPTSSIPHDGRSTNSL HRAPGKATETHFEPMKAAGRGGILCKATGTELPKTMGTHLSHQRDLDVRPGVK >FGENESH:[mRNA] 3 1 exon (s) 9875 - 10447 573 bp, chain + ATGACAGCATCCGCGTCCTCCTTTTCATCATCTCAGGGTGTCCAGCAGCCCTCCATCTAC AGCTTCTCCCAAATAACCAGAAGCTTGTTTCTCAGCAATGGTGTGGCCGCCAACGACAAA
CTCCTTCTGTCCAGCAATCGCATCACCGCCATTGTCAATGCCTCGGTGGAAGTGGTCAAC GTATTCTTCGAGGGCATTCAGTACATAAAGGTGCCTGTTACCGATGCTCGTGACTCGCGT CTCTACGACTTTTTTGACCCCATTGCTGATCTTATCCACACCATCGATATGAGGCAGGGC CGTACGCTGCTGCACTGCATGGCTGGAGTGAGCCGTTCCGCCTCACTGTGCCTTGCGTAC CTCATGAAATACCACTCCATGTCGCTGCTGGACGCCCATACATGGACCAAGTCGCGCCGC CCCATCATCCGGCCCAACAACGGCTTTTGGGAACAGCTCATCAATTACGAATTCAAGCTG TTTAATAACAACACCGTGCGCATGATCAACTCGCCGGTAGGTAACATCCCTGACATCTAT GAGAAGGACCTACGTATGATGATATCAATGTAA >FGENESH: 3 1 exon (s) 9875 - 10447 190 aa, chain + MTASASSFSSSQGVQQPSIYSFSQITRSLFLSNGVAANDKLLLSSNRITAIVNASVEVVN VFFEGIQYIKVPVTDARDSRLYDFFDPIADLIHTIDMRQGRTLLHCMAGVSRSASLCLAY LMKYHSMSLLDAHTWTKSRRPIIRPNNGFWEQLINYEFKLFNNNTVRMINSPVGNIPDIY EKDLRMMISM