Section 5, Chapter 2

Page 1


Organic Molecules: Proteins Proteins have many functions:

• Proteins provide structural material. • They are a source of energy. • Some act as chemical messengers (hormones, neurotransmitters). • Many proteins are receptors. • Most enzymes are proteins.


Proteins: enzymes Enzymes catalyze reactions (increases rate), but are not consumed by the reaction (reusable).

Synthesis reaction involving an enzyme


Proteins: amino acids

All amino acids consists of:

• An amino group (-NH2) • A Carboxyl Group (-COOH) • A single Carbon atom • An “R” group (R = rest of the molecule) • 1 of 20 possible “R” groups = determines amino acid




Peptide bond (red) joins two amino acids.




4 Levels of Protein Structure A protein’s shape, or conformation, determines its function. Therefore, it’s important to understand a protein’s shape at 4 levels.


4 Levels of Protein Structure

Red dots indicate hydrogen bonding


4 Levels of Protein Structure


4 Levels of Protein Structure


4 Levels of Protein Structure


Protein Structure Conformation • Complex 3 dimensional fold of a protein • Conformation determines a protein’s function

Denature • Treatment that alters the shape of a protein to make it nonfunctional • Heat, pH changes, radiation, certain chemicals may denature proteins


Nucleic acids: overview

Nucleic Acids • Includes DNA and RNA • Genetic information • Consists of monomers, called nucleotides


RNA • • • •

Contains the sugar ribose (ribonucleic acid) RNA is a single-stranded nucleic acid. Transcribes DNA for protein synthesis RNA also may act as an enzyme

DNA • DNA contains a sugar, called deoxyribose (deoxyribonucleic acid) • Double-stranded helix • Encodes genetic information for protein synthesis.


Nucleotides • Monomers of Nucleic Acids

3 Components of Nucleotides • 5 Carbon Sugar (S) • Nitrogenous Base (B) • Phosphate Group (P)


sugar phosphate

RNA Sugar = ribose DNA Sugar = deoxyribose

nitrogenous base



H bonds

Antiparallel




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